PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095255.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family GeBP
Protein Properties Length: 377aa    MW: 42184.1 Da    PI: 9.28
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573115.33.7e-36169259297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                     lfqr+wse+Deiv+LqG+id+ +k++++p++d++af++f+kk+++++++++ql +KirrLK+K++++++k     +++fsk+h+qk++elskkiW
  XP_011095255.1 169 LFQRVWSEDDEIVILQGMIDYVTKKKSDPVADLNAFHDFIKKNLHADMTRTQLQDKIRRLKRKYQNNKSK-----DKTFSKPHEQKAYELSKKIW 258
                     69*****************************************************************999.....99****************** PP

          DUF573  97 g 97 
                     g
  XP_011095255.1 259 G 259
                     8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.6E-32170259IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MAKNREPEKP VESETESGEE EDSEDAGSQD SDSEPDLAQV SKKPSSSTQA TPKKAQPQSS  60
SKPQPQPQPQ PQPPSSSDEE ESGFDSDESD PNVKPIASKP MENEQKSTDG ARKLRSKPIA  120
SDLVTPAKST AAKRPAEEKE TDAKDAKKKK KAKPDTTEKK STDDSKKLLF QRVWSEDDEI  180
VILQGMIDYV TKKKSDPVAD LNAFHDFIKK NLHADMTRTQ LQDKIRRLKR KYQNNKSKDK  240
TFSKPHEQKA YELSKKIWGN ESGKENGVEK LMGNGSALRK NRGKRPNTVE NEEAKDVNSD  300
PERLLPAKRV NSGGVTVEER IWRIGAEYFE SGKGLEGEKE WKKLKVEEME VNLRQLEVKT  360
AQAKLVLDAV KSGSLKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095255.10.0PREDICTED: mediator-associated protein 1-like
TrEMBLA0A022R5268e-68A0A022R526_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-28DNA-binding storekeeper protein-related transcriptional regulator